PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00609.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CAMTA
Protein Properties Length: 968aa    MW: 108543 Da    PI: 6.5759
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00609.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.12.7e-56201363118
              CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 
                       +e ++rwl++ ei++iL n++k++++ +++++p sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg++++l+cyYah+e+n++f
  Migut.B00609.2.p  20 SEaQHRWLRPAEIVEILRNYQKFHISPAAPNKPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDMLHCYYAHGEDNENF 112
                       4449***************************************************************************************** PP

              CG-1  95 qrrcywlLeeelekivlvhylevk 118
                       qrr+ywlLe++l +iv++hylevk
  Migut.B00609.2.p 113 QRRSYWLLEQDLMHIVFAHYLEVK 136
                       *********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.37815141IPR005559CG-1 DNA-binding domain
SMARTSM010762.0E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038595.4E-4921135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.2E-6380467IPR013783Immunoglobulin-like fold
PfamPF018337.0E-5381466IPR002909IPT domain
SuperFamilySSF812965.13E-15381467IPR014756Immunoglobulin E-set
CDDcd002047.07E-14579672No hitNo description
Gene3DG3DSA:1.25.40.202.3E-16579676IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.2E-16580674IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029718.271580674IPR020683Ankyrin repeat-containing domain
PfamPF127962.1E-7585672IPR020683Ankyrin repeat-containing domain
SMARTSM002489.6E-5613642IPR002110Ankyrin repeat
PROSITE profilePS5008810.659613645IPR002110Ankyrin repeat
SMARTSM002482200652681IPR002110Ankyrin repeat
SMARTSM000150.73788810IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.59789818IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525407.97E-8791839IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.0013791809IPR000048IQ motif, EF-hand binding site
SMARTSM000153.8E-4811833IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.109812836IPR000048IQ motif, EF-hand binding site
PfamPF006123.9E-5814833IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 968 aa     Download sequence    Send to blast
MAESGSSSLG FRLDIKQILS EAQHRWLRPA EIVEILRNYQ KFHISPAAPN KPVSGSVFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDMLH CYYAHGEDNE NFQRRSYWLL  120
EQDLMHIVFA HYLEVKGNKT NISSSRNSDT VVSNSENNSV LLSSSFHGTS PSSTLSSACE  180
DAESEDNHQA SSRFHSFPES PLTDGSHYAQ SNSYNPTSSP GQTAFKQESG CYLPVQANWQ  240
GNTSFEEKSL HVNQENFVRP FYTLPGEQKE QSEQKNLQML LSEAETGHAM NQNMENLSSM  300
GNENYSLFLK KPSISGLQKE ENLKKADSFS RWIAKELEDY DELNLQSNNG ISWSGYGMPA  360
QLQVDLDTLN PSISQDQLFS IMDFSPNWAY TNMKTKVLIT GIFLKSEQEL SKCRWSIMFG  420
QVEVAAEVLA DGILCCHAPL QKPGLVPFYV TCSNRLACSE IREFEYRFEQ DQSMGGIDER  480
GSTNVMHLYQ RFETKLSLET SGSDLNSSGN DFGKQNIINK IFSFMEEENN QEIKLTPEKD  540
TTELMVIGEL LLQKQLKEKF YTWLFHKLSY DSESIADVKG GQGVLHLAAA LGFNWVLQPI  600
IVSGISIDFR DVNGWTALHW AAHYGREDTV AALVSLGASP GALTDPSAEY PLGRTPADLA  660
SSSGHKGISG FLAETTLTTH LSTLGVDDPL VHGGSGFSGS RAVQTVSERL AVPTTGEDVP  720
DTLSLKDSLA AICNATQAAA RIHQIFRTQS FHRKQLLEHG GDESVTPNEN AISLVAGKNS  780
RLGRASGGAN AAAVRIQKKF RGWKKRKEFL LIRQKVVKIQ AHFRGHQVRK KYKTIIWSVG  840
IMEKVILRWR RKRSGLRGFR SDAVAKVESG QGTLPQEDDY DFLKEGRKQT EERMQKALAR  900
VKSMAQYPEA RAQYRRLLTA AEGFRETKDA SDAEIQETSD DMFYPQDDLI DIESLLDDDT  960
FMSLAFQ*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828340.10.0PREDICTED: calmodulin-binding transcription activator 2 isoform X1
RefseqXP_012828341.10.0PREDICTED: calmodulin-binding transcription activator 2 isoform X1
SwissprotQ9FY740.0CMTA1_ARATH; Calmodulin-binding transcription activator 1
TrEMBLA0A022PSL80.0A0A022PSL8_ERYGU; Uncharacterized protein
STRINGSolyc01g105230.2.10.0(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.20.0ethylene induced calmodulin binding protein